BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020B04SP1|AL427571
(912 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1703 1777 0.0
>3x_Contig1703
Length = 17919
Score = 1777 bits (895), Expect = 0.0
Identities = 909/914 (99%), Gaps = 2/914 (0%)
Strand = Plus / Minus
Query: 1 gatctgagggtgggggagaaatcggacctgagatgtcagatcggaacttcttcttcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 gatctgagggtgggggagaaatcggacctgagatgtcagatcggaacttcttcttcttcc 4982
Query: 61 ctctgtttctcagtgagagcggggtagatagttgataaatcactaacggtttttctgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 ctctgtttctcagtgagagcggggtagatagttgataaatcactaacggtttttctgttt 4922
Query: 121 ccattgaataaaatagtattaaaaacgttataaaagaacatatttcaagagtacttagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4921 ccattgaataaaatagtattaaaaacgttataaaagaacatatttcaagagtacttagtg 4862
Query: 181 attttgaaagtgtgcaatgttggataaaattaagacaagccagttagtatctgctaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4861 attttgaaagtgtgcaatgttggataaaattaagacaagccagttagtatctgctaaaga 4802
Query: 241 taaaattcattctgacgaattttacacaccagttgtagtttgattgtacgtcaattgttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4801 taaaattcattctgacgaattttacacaccagttgtagtttgattgtacgtcaattgttc 4742
Query: 301 ttgtacgcgaagc--agcagtagtgtgtcccctttggatgttttctcttatgacattcgg 358
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4741 ttgtacgcgaagcgcagcagtagtgtgtcccctttggatgttttctcttatgacattcgg 4682
Query: 359 cactttcttcggggaaactggtttcctgatctgattgccgccattaagtcttataggcga 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4681 cactttcttcggggaaactggtttcctgatctgattgccgccattaagtcttataggcga 4622
Query: 419 agaatccaagtgatcgtagtagtctaggtcatgattttgttcttggttgcacaaatcttc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4621 agaatccaagtgatcgtagtagtctaggtcatgattttgttcttggttgcacaaatcttc 4562
Query: 479 ttcatccagtctgccctcatgacttttacgttcttgatgtttcacaagagaatcttctga 538
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4561 ttcatccagtctgccctcatgacttttacgttctttatgtttcacaagagaatcttctga 4502
Query: 539 atggaacttcttaccacaacctgcacacgagtmacctttctctaaatgcgatttcttgtg 598
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4501 atggaacttcttaccacaacctgcacacgagtaacctttctctaaatgcgatttcttgtg 4442
Query: 599 tcgtagcaaatcatggtttctgacaaaagccttttgacatcctgggaaatcacacttgta 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4441 tcgtagcaaatcatggtttctgacaaaagccttttgacatcctgggaaatcacacttgta 4382
Query: 659 cggcctatcgcaaagatgggtttggatatgagttctcgcgttgtaccgtctgttaaacct 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4381 cggcctatcgcaaagatgggtttggatatgagttctcgcgttgtaccgtctgttaaacct 4322
Query: 719 cttttgacaatctttaaacttgcattggaactgtttaggtccaatttcgagaatgtactt 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4321 cttttgacaatctttaaacttgcattggaactgtttaggtccaatttcgagaatgtactt 4262
Query: 779 gtcaatctgttctctaggcagcatgccataccgtttaccgttccttcccccacttaccat 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4261 gtcaatctgttctctaggcagcatgccataccgtttaccgttccttcccccacttaccat 4202
Query: 839 ggggctggtgttcaaattggtgtttaggccaattccgttatgattgggscctagtcccaa 898
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4201 ggggctggtgttcaaattggtgtttaggccaattccgttatgattgggccctagtcccaa 4142
Query: 899 atcgacatggttat 912
||||||||||||||
Sbjct: 4141 atcgacatggttat 4128
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7356
Number of Sequences: 1807
Number of extensions: 7356
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)